MapMan files archive

Mercator version:

MapMan mapping files


Actinidia chinensis
   EnsemblPlants 44
           X4.2 actinidia_chinensis download (m02, text, excel )  (X4_R2.0)
Aegilops tauschii
   EnsemblPlants 44
           X4.2 aegilops_tauschii download (m02, text, excel )  (X4_R2.0)
Amborella trichopoda
   EnsemblPlants 44
           X4.2 amborella_trichopoda download (m02, text, excel )  (X4_R2.0)
Aquilegia coerulea
   Phytozome v9.0
           Acoerulea_195 download (m02, text, excel )  (1.0)
Arabidopsis halleri
   EnsemblPlants 44
           X4.2 arabidopsis_halleri download (m02, text, excel )  (X4_R2.0)
Arabidopsis lyrata
   EnsemblPlants 44
           X4.2 arabidopsis_lyrata download (m02, text, excel )  (X4_R2.0)
   Phytozome v9.0
           Alyrata_107 download (m02, text, excel )  (1.0)
Arabidopsis thaliana
   Affymetrix
           Ath_AFFY_ATH1_TAIR8 download (m02, text, excel )  (Dec08)
           Ath_AFFY_ATH1_TAIR9_Jan2010 download (m02, text, excel )  (1.0)
           Mapping_overview_Affymetrix_2005 download (m02, text, excel )  (5.0c1)
           ath_affy_8k_experimental download (m02, text, excel )  (0.6)
           ath_affy_tair6 download (m02, text, excel )  (Sep06)
           Ath_AFFY_TAIR7 download (m02, text, excel )  (Aug08)
           Ath_AFFY_ATH1_TAIR8_041208 download (m02, text, excel )  (1.0)
           Ath_AFFY_ATH1_TAIR10_Aug2012 download (m02, text, excel )  (1.0)
           Ath_AFFY_STv1.1_TRANSCRIPT_CLUSTER_TAIR10_LOCUS download (m02, text, excel )  (1.0)
   AGILENT
           Ath_AGILENT_TAIR8_0609 download (m02, text, excel )  (1.0)
   Araport11
           X4.4 Arabidopsis thaliana download (m02, text, excel )  (X4_R4.0)
           X4 Araport11 R1.0 download (m02, text, excel )  (X4_R1.0)
   EnsemblPlants 44
           X4.2 arabidopsis_thaliana download (m02, text, excel )  (X4_R2.0)
   TAIR 6
           Ath_AGI_TAIR6 download (m02, text, excel )  (SEP06)
   TAIR 7
           Ath_AGI_TAIR7 download (m02, text, excel )  (June07)
           Ath_AGI_TAIR7 download (m02, text, excel )  (July07)
   TAIR 8
           Ath_AGI_TAIR8 download (m02, text, excel )  (Dec08)
   TAIR10
           Ath_AGI_LOCUS_TAIR10_Aug2012 download (m02, text, excel )  (1.0)
           Ath_AGI_ISOFORM_MODEL_TAIR10_Aug2012 download (m02, text, excel )  (1.0)
   TAIR9
           Seed_custom_arabidopsis download (m02, text, excel )  (1)
           Ath_AGI_TAIR9_Jan2010 download (m02, text, excel )  (1.0)
           Ath_AGI_MODELS_TAIR9_Jan09 download (m02, text, excel )  (1.0)
   no id type
           MappingMetabolites download (m02, text, excel )  (1.0)
           Mapping_overview_AgiCode download (m02, text, excel )  (5.0b2)
           ath_catma_experimental download (m02, text, excel )  (0.6)
Beta vulgaris
   EnsemblPlants 44
           X4.2 beta_vulgaris download (m02, text, excel )  (X4_R2.0)
   Phytozome v13
           X4.4 Beta vulgaris download (m02, text, excel )  (X4_R4.0)
Brachypodium distachyon
   EnsemblPlants 44
           X4.2 brachypodium_distachyon download (m02, text, excel )  (X4_R2.0)
   Phytozome v9.0
           Bdistachyon_192 download (m02, text, excel )  (1.0)
Brassica napus
   Affymetrix
           BrasEX1s_unigene download (m02, text, excel )  (1.0)
   EnsemblPlants 44
           X4.2 brassica_napus download (m02, text, excel )  (X4_R2.0)
   genome_release
           Brassica_napus.annotation_v5.cds.fa.gz download (m02, text, excel )  (5.0)
Brassica oleracea
   EnsemblPlants 44
           X4.2 brassica_oleracea download (m02, text, excel )  (X4_R2.0)
Brassica rapa
   EnsemblPlants 44
           X4.2 brassica_rapa download (m02, text, excel )  (X4_R2.0)
   Phytozome v9.0
           Brapa_197 download (m02, text, excel )  (1.0)
Camellia sinensis
   DASZ_v1
           X4.4 Camellia sinensis download (m02, text, excel )  (X4_R4.0)
Capsella rubella
   Phytozome v9.0
           Crubella_183 download (m02, text, excel )  (1.0)
Carica papaya
   Phytozome v9.0
           Cpapaya_113 download (m02, text, excel )  (1.0)
Chenopodium quinoa
   JGI v1
           X4.4 Chenopodium quinoa download (m02, text, excel )  (X4_R4.0)
Chlamydomonas reinhardtii
   EnsemblPlants 44
           X4.2 chlamydomonas_reinhardtii download (m02, text, excel )  (X4_R2.0)
   Phytozome v9.0
           Creinhardtii_236 download (m02, text, excel )  (1.0)
   no id type
           Chlamydomonas rheinhardtii download (m02, text, excel )  (Nov07)
Chondrus crispus
   EnsemblPlants 44
           X4.2 chondrus_crispus download (m02, text, excel )  (X4_R2.0)
Citrus clementina
   Phytozome v9.0
           Cclementina_182 download (m02, text, excel )  (1.0)
Citrus sinensis
   Phytozome v9.0
           Csinensis_154 download (m02, text, excel )  (1.0)
Citrus spp.
   Affymetrix
           Citrus_AFFY_Jul10 download (m02, text, excel )  (1.0)
Coccomyxa subellipsoidea C-169
   Phytozome v9.0
           CsubellipsoideaC169_227 download (m02, text, excel )  (1.0)
Corcorus capsularis
   EnsemblPlants 44
           X4.2 corchorus_capsularis download (m02, text, excel )  (X4_R2.0)
Cucumis sativus
   ChineseLong v3
           X4.4 Cucumis sativus download (m02, text, excel )  (X4_R4.0)
   EnsemblPlants 44
           X4.2 cucumis_sativus download (m02, text, excel )  (X4_R2.0)
   Phytozome v9.0
           Csativus_122 download (m02, text, excel )  (1.0)
   no id type
           Chloroplast PlasTi-microarray mapping download (m02, text, excel )  (1.0)
Cyanidioschyzon merolae
   EnsemblPlants 44
           X4.2 cyanidioschyzon_merolae download (m02, text, excel )  (X4_R2.0)
Daucus carota
   EnsemblPlants 44
           X4.2 daucus_carota download (m02, text, excel )  (X4_R2.0)
Dioscorea rotundata
   EnsemblPlants 44
           X4.2 dioscorea_rotundata download (m02, text, excel )  (X4_R2.0)
Eucalyptus grandis
   Phytozome v9.0
           Egrandis_201 download (m02, text, excel )  (1.0)
Fragaria vesca
   Phytozome v9.0
           Fvesca_226 download (m02, text, excel )  (1.0)
Galdieria sulphuraria
   EnsemblPlants 44
           X4.2 galdieria_sulphuraria download (m02, text, excel )  (X4_R2.0)
Glycine max
   Affymetrix
           Gmax_AFFY_09 download (m02, text, excel )  (1.0)
   EnsemblPlants 44
           X4.2 glycine_max download (m02, text, excel )  (X4_R2.0)
   genome_release
           Gmax_109_peptide download (m02, text, excel )  (1.1)
   Phytozome v13
           X4.4 Glycine max download (m02, text, excel )  (X4_R4.0)
   Phytozome v9.0
           Gmax_189 download (m02, text, excel )  (1.0)
Gossypium hirsutum
   Affymetrix
           Cotton_AFFY_Jan12 download (m02, text, excel )  (1.0)
   no id type
           Ghir_MAPPING_Feb10 download (m02, text, excel )  (1.0)
Gossypium raimondii
   EnsemblPlants 44
           X4.2 gossypium_raimondii download (m02, text, excel )  (X4_R2.0)
   Phytozome v9.0
           Graimondii_221 download (m02, text, excel )  (1.0)
Helianthus annuus
   EnsemblPlants 44
           X4.2 helianthus_annuus download (m02, text, excel )  (X4_R2.0)
Hordeum vulgare
   Affymetrix
           Hvu_Affy download (m02, text, excel )  (1.1)
   AGILENT
           Hvul_AGILENT_DESIGNID_021623 download (m02, text, excel )  (1.0)
   EnsemblPlants 44
           X4.2 hordeum_vulgare download (m02, text, excel )  (X4_R2.0)
   genome_release
           HVU_MIPSV1.0 download (m02, text, excel )  (1.0)
Leersia perrieri
   EnsemblPlants 44
           X4.2 leersia_perrieri download (m02, text, excel )  (X4_R2.0)
Linum usitatissimum
   Phytozome v9.0
           Lusitatissimum_200 download (m02, text, excel )  (1.0)
Lotus japonicus
   Gifu v1.2
           X4.4 Lotus japonicus download (m02, text, excel )  (X4_R4.0)
Lupinus angustifolius
   EnsemblPlants 44
           X4.2 lupinus_angustifolius download (m02, text, excel )  (X4_R2.0)
Malus domestica
   Phytozome v9.0
           Mdomestica_196 download (m02, text, excel )  (1.0)
Manihot esculenta
   EnsemblPlants 44
           X4.2 manihot_esculenta download (m02, text, excel )  (X4_R2.0)
   JGI v7.0
           X4.4 Manihot esculenta download (m02, text, excel )  (X4_R4.0)
   Phytozome v9.0
           Mesculenta_147 download (m02, text, excel )  (1.0)
Marchantia polymorpha
   EnsemblPlants 44
           X4.2 marchantia_polymorpha download (m02, text, excel )  (X4_R2.0)
   Phytozome v13
           X4.4 Marchantia polymorpha download (m02, text, excel )  (X4_R4.0)
Medicago truncatula
   Affymetrix
           Mt_AFFY_Mt3.0_0510 download (m02, text, excel )  (1.0)
           Medicago_AFFY_09 download (m02, text, excel )  (1.0)
   EnsemblPlants 44
           X4.2 medicago_truncatula download (m02, text, excel )  (X4_R2.0)
   genome_release
           Mt_Mt3.0_0510 download (m02, text, excel )  (1.0)
           Mt_Mt3.5_v3_0411 download (m02, text, excel )  (1.0)
           Mt_Mt4.0_v1 download (m02, text, excel )  (1.0)
   Phytozome v9.0
           Mtruncatula_198 download (m02, text, excel )  (1.0)
   no id type
           Medicago16k download (m02, text, excel )  (1.0)
Micromonas pusilla CCMP1545
   Phytozome v9.0
           MpusillaCCMP1545_228 download (m02, text, excel )  (1.0)
Mimulus guttatus
   Phytozome v9.0
           Mguttatus_140 download (m02, text, excel )  (1.0)
Musa acuminata
   EnsemblPlants 44
           X4.2 musa_acuminata download (m02, text, excel )  (X4_R2.0)
Nicotiana attenuata
   EnsemblPlants 44
           X4.2 nicotiana_attenuata download (m02, text, excel )  (X4_R2.0)
Nicotiana tabacum
   AGILENT
           Ntob_AGILENT44K_mapping download (m02, text, excel )  (1.0)
Oryza barthii
   EnsemblPlants 44
           X4.2 oryza_barthii download (m02, text, excel )  (X4_R2.0)
Oryza brachyantha
   EnsemblPlants 44
           X4.2 oryza_brachyantha download (m02, text, excel )  (X4_R2.0)
Oryza glaberrima
   EnsemblPlants 44
           X4.2 oryza_glaberrima download (m02, text, excel )  (X4_R2.0)
Oryza glumipatula
   EnsemblPlants 44
           X4.2 oryza_glumipatula download (m02, text, excel )  (X4_R2.0)
Oryza longistaminata
   EnsemblPlants 44
           X4.2 oryza_longistaminata download (m02, text, excel )  (X4_R2.0)
Oryza meridionalis
   EnsemblPlants 44
           X4.2 oryza_meridionalis download (m02, text, excel )  (X4_R2.0)
Oryza nivara
   EnsemblPlants 44
           X4.2 oryza_nivara download (m02, text, excel )  (X4_R2.0)
Oryza punctata
   EnsemblPlants 44
           X4.2 oryza_punctata download (m02, text, excel )  (X4_R2.0)
Oryza rufipogon
   EnsemblPlants 44
           X4.2 oryza_rufipogon download (m02, text, excel )  (X4_R2.0)
Oryza sativa Indica
   EnsemblPlants 44
           X4.2 oryza_indica download (m02, text, excel )  (X4_R2.0)
Oryza sativa Japonica Group
   Affymetrix
           Osa_AFFY_150909 download (m02, text, excel )  (1.0)
   EnsemblPlants 44
           X4.2 oryza_sativa download (m02, text, excel )  (X4_R2.0)
   MSU_v7
           Osa_MSU_v7 download (m02, text, excel )  (1.0)
           X4 Oryza sativa download (m02, text, excel )  (X4_R4.0)
   OSGI
           OSGI.release_19.mapping download (m02, text, excel )  (1.0)
   Phytozome v9.0
           Osativa_204 download (m02, text, excel )  (1.0)
   RAPDB-IRGSP1.0
           Osa_RAPDB_mapping download (m02, text, excel )  (1.0)
   no id type
           Rice_japonica_automatic_mapping08 download (m02, text, excel )  (08)
           Rice_japonica_mapping_merged_08 download (m02, text, excel )  (1.0)
           Rice_japonica_manual_mapping08 download (m02, text, excel )  (08)
Ostreococcus lucimarinus
   EnsemblPlants 44
           X4.2 ostreococcus_lucimarinus download (m02, text, excel )  (X4_R2.0)
   Phytozome v9.0
           Olucimarinus_231 download (m02, text, excel )  (1.0)
Panicum hallii var. Filipes
   EnsemblPlants 44
           X4.2 panicum_hallii_fil2 download (m02, text, excel )  (X4_R2.0)
Panicum hallii var. Hallii
   EnsemblPlants 44
           X4.2 panicum_hallii_hal2 download (m02, text, excel )  (X4_R2.0)
Panicum virgatum
   Affymetrix
           Pvi_cDNAa520831.mapping download (m02, text, excel )  (1.0)
Phaseolus vulgaris
   EnsemblPlants 44
           X4.2 phaseolus_vulgaris download (m02, text, excel )  (X4_R2.0)
   genome_release
           Phaseolus vulgaris v1.0 (Common bean) download (m02, text, excel )  (1.0)
Physcomitrella patens
   EnsemblPlants 44
           X4.2 physcomitrella_patens download (m02, text, excel )  (X4_R2.0)
   JGI v3.3
           X4.4 Physcomitrella patens download (m02, text, excel )  (X4_R4.0)
   Phytozome v9.0
           Ppatens_152 download (m02, text, excel )  (1.0)
Populus trichocarpa
   Affymetrix
           Ptrich_AFFY_09 download (m02, text, excel )  (1.0)
   Araport11
           X4.2 populus_trichocarpa download (m02, text, excel )  (X4_R2.0)
   JGIv1.1
           Ptr_JGI1_1_0309 download (m02, text, excel )  (1.0)
   Phytozome v9.0
           Ptrichocarpa_v3.0_210_peptide download (m02, text, excel )  (1.0)
Prunus persica
   EnsemblPlants 44
           X4.2 prunus_persica download (m02, text, excel )  (X4_R2.0)
   Phytozome v9.0
           Ppersica_139 download (m02, text, excel )  (1.0)
Ricinus communis
   Phytozome v9.0
           Rcommunis_119 download (m02, text, excel )  (1.0)
Saccharum officinarum
   Affymetrix
           Soff_AFFY_09 download (m02, text, excel )  (1.0)
Salvia miltiorrhiza
   DSS3 v1
           X4.4 Salvia miltiorrhiza download (m02, text, excel )  (X4_R2.0)
Selaginella moellendorffii
   EnsemblPlants 44
           X4.2 selaginella_moellendorffii download (m02, text, excel )  (X4_R2.0)
   Phytozome v9.0
           Smoellendorffii_91 download (m02, text, excel )  (1.0)
Setaria italica
   EnsemblPlants 44
           X4.2 setaria_italica download (m02, text, excel )  (X4_R2.0)
   Phytozome v9.0
           Sitalica_164 download (m02, text, excel )  (1.0)
Solanum lycopersicum
   Affymetrix
           Slyc_AFFY_SGN_BUILD2_070709 download (m02, text, excel )  (1.1)
   AGILENT
           Slyc_AGILENT44k_SGN_BUILD2 download (m02, text, excel )  (1.0)
   EnsemblPlants 44
           X4.2 solanum_lycopersicum download (m02, text, excel )  (X4_R2.0)
   ITAG v4.0
           X4.4 Solanum lycopersicum download (m02, text, excel )  (X4_R4.0)
   ITAG2.3
           Slyc_ITAG2.3 download (m02, text, excel )  (1.1)
   SGN
           SGN_UnigeneR2_commodity download (m02, text, excel )  (1.0)
           Ses_SGNR200607 download (m02, text, excel )  (31-05-2007)
           Slyc_SGN_BUILD2_070709 download (m02, text, excel )  (1.1)
   no id type
           Ses_EUTOM1 download (m02, text, excel )  (Nov08)
           Ses_TOM1 download (m02, text, excel )  (Sep06)
           Ses_Unigene download (m02, text, excel )  (Sep06)
           Ses_TOM2 download (m02, text, excel )  (May07)
Solanum tuberosum
   EnsemblPlants 44
           X4.2 solanum_tuberosum download (m02, text, excel )  (X4_R2.0)
   genome_release
           Stub_PGSC_DM_v3.4 download (m02, text, excel )  (1.0)
   Phytozome v9.0
           Stuberosum_206 download (m02, text, excel )  (1.0)
   SGN
           Stub_SGN_UNIGENES_0609 download (m02, text, excel )  (1.0)
   no id type
           Stu_TIGR download (m02, text, excel )  (August07)
           Potato_POCI download (m02, text, excel )  (Sep08)
Sorghum bicolor
   EnsemblPlants 44
           X4.2 sorghum_bicolor download (m02, text, excel )  (X4_R2.0)
   Phytozome v9.0
           Sbicolor_79 download (m02, text, excel )  (1.0)
Spirodela polyrhiza
   JGI v2
           X4.2 Spirodela polyrhiza download (m02, text, excel )  (X4_R4.0)
Thellungiella halophila
   Phytozome v9.0
           Thalophila_173 download (m02, text, excel )  (1.0)
Thellungiella salsuginea
   AGILENT
           Thels_AGILENT44k download (m02, text, excel )  (1.0)
Theobroma cacao
   EnsemblPlants 44
           X4.2 theobroma_cacao download (m02, text, excel )  (X4_R2.0)
   Phytozome v9.0
           Tcacao_233 download (m02, text, excel )  (1.0)
Trifolium pratense
   EnsemblPlants 44
           X4.2 trifolium_pratense download (m02, text, excel )  (X4_R2.0)
Triticum aestivum
   Affymetrix
           Taes_AFFY_0709 download (m02, text, excel )  (1.0)
   DFCI wheat gene index
           Taes_TAGI_release_12 download (m02, text, excel )  (1.0)
   EnsemblPlants 44
           X4.2 triticum_aestivum download (m02, text, excel )  (X4_R2.0)
   genome_release
           IWGSP_MIPSv2.2 download (m02, text, excel )  (2.2)
Triticum dicoccoides
   EnsemblPlants 44
           X4.2 triticum_dicoccoides download (m02, text, excel )  (X4_R2.0)
Triticum urartu
   EnsemblPlants 44
           X4.2 triticum_urartu download (m02, text, excel )  (X4_R2.0)
Vigna angularis
   EnsemblPlants 44
           X4.2 vigna_angularis download (m02, text, excel )  (X4_R2.0)
Vigna radiata
   EnsemblPlants 44
           X4.2 vigna_radiata download (m02, text, excel )  (X4_R2.0)
Vitis vinifera
   Affymetrix
           Vvin_AFFY_09 download (m02, text, excel )  (0.2)
   EnsemblPlants 44
           X4.2 vitis_vinifera download (m02, text, excel )  (X4_R2.0)
   OPERON
           Vvi_VVGIv5_OPERON_09 download (m02, text, excel )  (1.0)
   Phytozome v9.0
           Vvinifera_145 download (m02, text, excel )  (1.0)
   VvGI version 5
           Vvi_VVGIv5_09 download (m02, text, excel )  (1.0)
Volvox carteri
   Phytozome v9.0
           Vcarteri_199 download (m02, text, excel )  (1.0)
Zea mays
   Affymetrix
           Zma_AFFY_chromosomal_locations download (m02, text, excel )  (1.1)
   AGILENT
           ZM_AGILENT_TARGETS_0509 download (m02, text, excel )  (1.0)
           Zm_AGILENT_PROBES_0509 download (m02, text, excel )  (1.0)
   EnsemblPlants 44
           X4.2 zea_mays download (m02, text, excel )  (X4_R2.0)
   genome_release
           Zm_GENOME_RELEASE_09 download (m02, text, excel )  (1.0)
           Zm_B73_5b_FGS_cds_2012 download (m02, text, excel )  (1.1)
   Phytozome v13
           X4.4 Zea mays download (m02, text, excel )  (X4_R4.0)
   Phytozome v9.0
           Zmays_181 download (m02, text, excel )  (1.0)
   no id type
           ZMGI.060509 download (m02, text, excel )  (1.0)
undefined species
   no id type
           BIN2EC download (m02, text, excel )  (1.0)
           R_mapping download (m02, text, excel )  (1.0)
           ChlorPlast_customarray download (m02, text, excel )  (1)
           BIN2GO download (m02, text, excel )  (1.0)

Download: MapMan_3.6.0RC1 Download: MapMan_3.6.0RC1

Windows Installer( MapManLicense 3.0)
  MapManInst-3_6_0RC1.exe
Jar File( MapManLicense 3.0)
  MapManInst-3_6_0RC1.jar
MacOSX Installer( MapManLicense 3.0)
  MapManInst-3_6_0RC1.dmg

Download: RobiNA_v1.2.4_build656 Download: RobiNA_v1.2.4_build656

MacOSX Installer( GNU LGPL v3.0)
  RobiNA_MacOSX_snow_leopard_universal.dmg
Windows Installer( GNU LGPL v3.0)
  RobiNA_Installer_Windows_64bit_JavaVM.exe
Jar File( GNU LGPL v3.0)
  RobiNA_Installer_Java.jar
Windows Installer( GNU LGPL v3.0)
  RobiNA_Installer_Windows_32bit_JavaVM.exe