MapMan files archive

• MapMan mapping files

• MapMan pathway diagrams

• MapMan example data files

Mercator version:	-- X4 Release3.0 X4 Release2.0 X4 Release1.0 X4 Release4.0 X4 Release5.0 Old version 1.0 Old version 1.1 Old version 1.2

MapMan pathway diagrams

• Overview

  • Prokaryotic_Ribosome LSU assembly	1.0	image file	xml file
    Cell_functions_overview	5.01	image file	xml file
    Transport_overview	5.01	image file	xml file
    Cellular_response_overview	5.02	image file	xml file
    Large_enzyme_families_overview	5.02	image file	xml file
    Metabolism_overview	5.03	image file	xml file
    Metabolites	1.0	image file	xml file
    Regulation_overview	5.01	image file	xml file
    transcription	5.01	image file	xml file
    RNA-ProteinSynthesis	5.01	image file	xml file
    Proteasom	5.01	image file	xml file
    Secondary Metabolism	5.01	image file	xml file
    Overview	1.0	image file	xml file
    protein targeting	0.9	image file	xml file
    receptor like kinases	0.8	image file	xml file
    ProteasomeDetailAndAutophagy	1	image file	xml file
    Biotic Stress	1	image file	xml file
    Prokaryotic Ribosome SSU 5S branch assembly	1.0	image file	xml file
    Ribosomal proteins overview	1.0	image file	xml file
    Core metabolism overview	1.0	image file	xml file
    RNA-ProteinSynthesis_2009	1.0	image file	xml file
    Protein glycosylation	1.0	image file	xml file
    X4.1 Metabolism overview R1.0	X4_R1.0	image file	xml file
    X4.4 Metabolism overview R4.0	X4_R4.0	image file	xml file
    X4.1 Kinase Families R1.0	X4_R1.0	image file	xml file
    X4.3 Metabolism overview R3.0	X4_R3.0	image file	xml file
    X4.5 Metabolism overview R5.0	X4_R5.0	image file	xml file

• Secondary Metabolism

  • Flavonoid	1.0	image file	xml file
    PolyamineSynthesis	0.8	image file	xml file
    Tocopherol Biosynthesis	1	image file	xml file
    Isopentenyl PP	0.8	image file	xml file
    ShikimateSynthesis	1.0	image file	xml file
    VolatileMevalonicPathway	0.7	image file	xml file
    VolatilePhenylPropanoids	0.7	image file	xml file
    VolatileCarotenoid	0.7	image file	xml file
    VolatilePhenylPropanoids2	0.4	image file	xml file
    Phenylpropanoids	0.9	image file	xml file
    Terpenoid	1.0	image file	xml file
    Coenzyme A Biosynthesis	1.0	image file	xml file
    Carotenoid	1.0	image file	xml file
    X4.4 Secondary metabolism R4.0	X4_R4.0	image file	xml file
    X4.2 Secondary metabolism R2.0	X4_R2.0	image file	xml file
    X4.3 Secondary metabolism R3.0	X4_R3.0	image file	xml file
    X4.5 Secondary metabolism R5.0	X4_R5.0	image file	xml file

• Primary Metabolism

  • photosynthesis	5.01	image file	xml file
    Lipid Biosynthesis	0.8	image file	xml file
    tetrapyrrole	1.0	image file	xml file
    Nucleotide Synthesis	0.6	image file	xml file
    Inositol Phosphates	1.0	image file	xml file

  • Amino Acids

    • N-metabolism	5.01	image file	xml file
      Sulphate Assimilation	5.01	image file	xml file
      AA_TCA	5.0	image file	xml file
      GABA Metabolism	1.0	image file	xml file
      HomoserineThreonineSynthesis	1.0	image file	xml file
      Alanine_Glutamate	1	image file	xml file
      Alanine_Glycine	1	image file	xml file
      X4.4 Amino acid metabolism R4.0	X4_R4.0	image file	xml file
      X4.3 Amino acid metabolism R3.0	X4_R3.0	image file	xml file
      X4.1 N-uptake R1.0	X4_R1.0	image file	xml file
      X4.2 Amino acid metabolism R2.0	X4_R2.0	image file	xml file
      X4.5 Amino acid metabolism R5.0	X4_R5.0	image file	xml file

  • Sugar and Sugar Derivatives

    • NDP_sugars_and_ascorbate	1	image file	xml file
      Plant glycolysis	1.0	image file	xml file
      Sucrose-Starch	5.10	image file	xml file
      Cell wall precursors	5.01	image file	xml file
      Pentose Phosphate	5.01	image file	xml file
      Glycolysis-TCA	5.01	image file	xml file
      Raffinose metabolism	1.0	image file	xml file
      Myo Inositol Synthesis	1.0	image file	xml file

  • Energy (TCA, mitochondria)

    • Mitochondrial_e-transport	5.01	image file	xml file
      TCA	5.01	image file	xml file
      C_TCA	5.0	image file	xml file

  • Lipid Metabolism

    • X4.3 Lipid metabolism R3.0	X4_R3.0	image file	xml file
      X4.4 Lipid metabolism R4.0	X4_R4.0	image file	xml file
      X4.2 Lipid metabolism R2.0	X4_R2.0	image file	xml file
      X4.5 Lipid metabolism R5.0	X4_R5.0	image file	xml file

  • Carbohydrate Metabolism

    • X4.3 Carbohydrate metabolism R3.0	X4_R3.0	image file	xml file
      X4.4 Carbohydrate metabolism R4.0	X4_R4.0	image file	xml file
      X4.2 Carbohydrate metabolism R2.0	X4_R2.0	image file	xml file
      X4.5 Carbohydrate metabolism R5.0	X4_R5.0	image file	xml file

  • Cellular Respiration

    • X4.4 Cellular respiration R4.0	X4_R4.0	image file	xml file
      X4.2 Cellular respiration R2.0	X4_R2.0	image file	xml file
      X4.3 Cellular respiration R3.0	X4_R3.0	image file	xml file
      X4.5 Cellular respiration R5.0	X4_R5.0	image file	xml file

  • Coenzyme Metabolism

    • X4.4 Coenzyme metabolism R4.0	X4_R4.0	image file	xml file
      X4.4 Tetrapyrrole biosynthesis R4.0	X4_R4.0	image file	xml file
      X4.3 Coenzyme metabolism R3.0	X4_R3.0	image file	xml file
      X4.3 Tetrapyrrole biosynthesis R3.0	X4_R3.0	image file	xml file
      X4.2 Coenzyme metabolism R2.0	X4_R2.0	image file	xml file
      X4.1 Tetrapyrrole biosynthesis R1.0	X4_R1.0	image file	xml file
      X4.2 Tetrapyrrole biosynthesis R2.0	X4_R2.0	image file	xml file
      X4.5 Coenzyme metabolism R5.0	X4_R5.0	image file	xml file
      X4.5 Tetrapyrrole R5.0	X4_R5.0	image file	xml file

  • Nucleotide Metabolism

    • X4.4 Nucleotide metabolism R4.0	X4_R4.0	image file	xml file
      X4.3 Nucleotide metabolism R3.0	X4_R3.0	image file	xml file
      X4.2 Nucleotide metabolism R2.0	X4_R2.0	image file	xml file
      X4.5 Nucleotide metabolism R5.0	X4_R5.0	image file	xml file

  • Polyamine Metabolism

    • X4.4 Polyamine metabolism R4.0	X4_R4.0	image file	xml file
      X4.3 Polyamine metabolism R3.0	X4_R3.0	image file	xml file
      X4.2 Polyamine metabolism R2.0	X4_R2.0	image file	xml file
      X4.5 Polyamine metabolism R5.0	X4_R5.0	image file	xml file

  • Photosynthesis

    • X4.4 Photosynthesis R4.0	X4_R4.0	image file	xml file
      X4.3 Photosynthesis R3.0	X4_R3.0	image file	xml file
      X4.2 Photosynthesis R2.0	X4_R2.0	image file	xml file
      X4.5 Photosynthesis R5.0	X4_R5.0	image file	xml file

• Hormones

  • ABA_metabolism	1.0	image file	xml file
    JA Synthesis	0.7	image file	xml file
    GA_Synthesis	0.9	image file	xml file
    GA_synthesis_later_stages	1.0	image file	xml file
    ABA_metabolism	0.6	image file	xml file
    SA_synthesis	1.0	image file	xml file
    X4.1 GA synthesis R1.0	X4_R1.0	image file	xml file
    X4.1 JA synthesis R1.0	X4_R1.0	image file	xml file
    X4.4 JA synthesis R4.0	X4_R4.0	image file	xml file
    X4.2 JA synthesis R2.0	X4_R2.0	image file	xml file
    X4.3 JA synthesis R3.0	X4_R3.0	image file	xml file
    X4.4 GA synthesis R4.0	X4_R4.0	image file	xml file
    X4.3 GA synthesis R3.0	X4_R3.0	image file	xml file
    X4.2 GA synthesis R2.0	X4_R2.0	image file	xml file
    X4.5 GA biosynthesis R5.0	X4_R5.0	image file	xml file

• Custom Arrays

  • Seed_custom_arabidopsis_Seed	2	image file	xml file
    Seed_custom_arabidopsis_Cellv	1	image file	xml file
    ChloroPlast_CustomArray_CUSTOM_MAPPING	1	image file	xml file
    Chloroplast PlasTi-microarray pathway	1.0	image file	xml file

• No Category

  • Lignin Synthesis	0.9.1	image file	xml file
    C_Lignin	5.0	image file	xml file
    R_stress	1.0	image file	xml file
    R_nutrients	1.0	image file	xml file
    Phylloquinone_Synthesis	0.9	image file	xml file
    X4.4 Chromatin organisation R4.0	X4_R4.0	image file	xml file
    X4.5 Chromatin organisation R5.0	X4_R5.0	image file	xml file

• Cell Wall

  • AGPs	1.0	image file	xml file
    X4.3 Lignin R3.0	X4_R3.0	image file	xml file
    X4.4 Lignin R4.0	X4_R4.0	image file	xml file
    X4.1 Lignin R1.0	X4_R1.0	image file	xml file
    X4.2 Lignin R2.0	X4_R2.0	image file	xml file
    X4.5 Lignin R5.0	X4_R5.0	image file	xml file

• Structure
• Redox homeostasis

  • X4.4 Tocopherol biosynthesis R4.0	X4_R4.0	image file	xml file
    X4.4 Redox homeostasis R4.0	X4_R4.0	image file	xml file
    X4.3 Tocopherol biosynthesis R3.0	X4_R3.0	image file	xml file
    X4.1 Tocopherol biosynthesis R1.0	X4_R1.0	image file	xml file
    X4.2 Tocopherol biosynthesis R2.0	X4_R2.0	image file	xml file
    X4.5 Tocopherol biosynthesis R5.0	X4_R5.0	image file	xml file
    X4.5 Redox homeostasis R5.0	X4_R5.0	image file	xml file

• Vesicle trafficking

  • X4.4 Vesicle trafficking R4.0	X4_R.0	image file	xml file
    X4.3 Vesicle trafficking R3.0	X4_R3.0	image file	xml file
    X4.5 Vesicle trafficking R5.0	X4_R5.0	image file	xml file