Select one or more Mercator4 'User jobs' and/or 'Reference species annotations' below to view the bin count results on the tree viewer.

User jobs
Reference species annotations

Select from reference/user job proteomes to display the differences visually on the heatmap




Protein family is encoded by the mitochondrial genome in most or all plant clades
Protein family is encoded by the plastidial genome in most or all plant clades
Protein family is present only in proteome B
Protein family in proteome B contains 2+ paralogs more than in proteome A
Protein family in proteome B contains 1 paralog more than in proteome A
Protein family in both proteomes contains the same number of 1+ paralogs
Protein family in proteome B contains 1 paralog less than in proteome A
Protein family in proteome B contains 2+ paralogs less than in proteome A
Protein family is present only in proteome A
Protein family is not present in either proteome

Version History

Current version #

Mercator4 v4.0 - release version (October 2021)

  • 29 functional root categories (BIN-01 .. BIN-28 + BIN-30)
  • 5201 functional leaf bin categories (including 1696 scaffold categories)
  • 1 enzyme-class root category (BIN-50)
  • 50 enzyme-class leaf categories (including 7 scaffold categories)
  • 1 unknown root category (BIN-35)
  • 2 unknown leaf categories
  • New Heatmap viewer to allow user to visualize results immediately

Legacy updates #

Mercator4 v3.0 - release version (July 2020)

  • 28 functional root categories (BIN-01 .. BIN-27 + BIN-30)
  • 4819 functional leaf bin categories (including 1601 scaffold categories)
  • 1 enzyme-class root category (BIN-50)
  • 50 enzyme-class leaf categories (including 7 scaffold categories)
  • 1 unknown root category (BIN-35)
  • 2 unknown leaf categories

Mercator4 v2.0 - release version (Feb 2020)

  • Update to FASTA annotations

Mercator4 v2.0 - release version (July 2019)

  • 27 functional root categories (BIN-01 .. BIN-27)
  • 4450 functional leaf bin categories (including 1484 scaffold categories)
  • 1 enzyme-class root category (BIN-50)
  • 50 enzyme-class leaf categories (including 7 scaffold categories)
  • 1 unknown root category (BIN-35)
  • 2 unknown leaf categories

Mercator4 v1.0 - release version

  • 27 functional root categories (BIN-01 .. BIN-27)
  • 4095 functional leaf bin categories (including 1332 scaffold categories)
  • 1 enzyme-class root category (BIN-50)
  • 50 enzyme-class leaf categories (including 7 scaffold categories)
  • 1 unknown root category (BIN-35)
  • 2 unknown leaf categories

Mercator4 v0.3 - Beta version

  • 27 functional root categories (BIN-01 .. BIN-27)
  • 3883 leaf bins categories (including 1249 scaffold categories)
  • 1 unknown root bin (BIN-35)
  • 2 unknown leaf categories

Mercator4 v0.2 - Beta version

  • 26 functional root categories (BIN-01 .. BIN-26)
  • 3744 leaf bin categories (including 1182 scaffold categories)
  • 1 unknown root category (BIN-35)
  • 2 unknown leaf categories
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