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BLAST cutoff for DNA sequence annotation with Mercator
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Mercator Annotation tool
BLAST cutoff for DNA sequence annotation with Mercator
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Ian Pierce
Rang:
Youngling
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2
Data d'incorporació:
26/03/16
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BLAST cutoff for DNA sequence annotation with Mercator
Resposta
30/04/16 00:30
Hi, reading the paper "Mercator: a fast and simple web server for genome scale functional annotation of plant sequence data" DOI: 10.1111/pce.12231 describes how the BLAST cutoff of 80 was determined by analyzing known soybean protein sequences.
Is there a recommended BLAST cutoff for annotating DNA sequence?
Thanks,
Ian Pierce
Graduate Student in Bioinformatics and Medical Informatics
San Diego State University.
Superior